Research Article
BibTex RIS Cite

Bioremediation-Associated Antibiofilm and Quorum-Sensing Inhibition by Pseudomonas aeruginosa Isolates from Petroleum-Contaminated Environments

Year 2026, Volume: 47 Issue: 1, 17 - 24, 27.02.2026
https://doi.org/10.17776/csj.1800467
https://izlik.org/JA29WA63RZ

Abstract

Petroleum-derived hydrocarbons represent a major environmental concern due to their persistence, toxicity, and disruptive effects on ecosystems. Bioremediation using hydrocarbon-degrading microorganisms has gained increasing attention as a sustainable strategy to mitigate such pollution. In this study, Pseudomonas aeruginosa isolates obtained from petroleum-oil-contaminated soils were screened for their quorum-sensing (QS) inhibitory and antibiofilm activities against pathogenic bacteria. Eleven isolates were identified and tested through agar well diffusion, violacein inhibition, and microtiter plate biofilm assays. Crude extracts significantly inhibited violacein production in Chromobacterium violaceum ATCC 12472, with dose-dependent suppression ranging from 17.8% to 72.5%. Isolates Z5 and Z10 exhibited the strongest quorum-quenching activities, while Z11 demonstrated high pigment inhibition (64.9% at 50 mg/mL) despite the absence of inhibition zones, suggesting violacein suppression independent of growth restriction. Biofilm inhibition assays revealed selective but substantial activity: Z3 and Z8 reduced Enterobacter aerogenes ATCC 51342 biofilms by 91% and 85%, respectively, whereas Z12 and Z13 inhibited Staphylococcus aureus ATCC 29213 (65% and 60%), Escherichia coli ATCC 25922 (71% and 70%), and Bacillus cereus 709 Roma (88% and 75%). No inhibition was observed against Pseudomonas aeruginosa ATCC 27853 or Listeria monocytogenes ATCC 7644. Overall, the findings suggest that petroleum-associated P. aeruginosa isolates may produce bioactive metabolites with dual anti-QS and antibiofilm functions. These properties not only highlight their ecological adaptation to hydrocarbon-polluted environments but also underline their potential as natural sources of bioactive compounds for bioremediation and antimicrobial applications. The strain-specific variability observed emphasizes the importance of screening environmental isolates for novel quorum-quenching agents with both environmental and clinical relevance.

Project Number

Project No: FBA-11-10

References

  • [1] Al-Zahrani, A., & Idris, G. (2010). Biological treatment of hydrocarbon contaminants: Petroleum hydrocarbon uptake by Pseudomonas alkanolytica. Journal of King Abdulaziz University-Engineering Sciences, 21(1), 39–53. https://doi.org/10.4197/ENG.21-1.3
  • [2] Alvarez, P. J. J., & Vogel, T. M. (1991). Substrate interactions of benzene, toluene, and para-xylene during microbial degradation by pure cultures and mixed culture aquifer slurries. Applied and Environmental Microbiology, 57(10), 2981–2985. https://doi.org/10.1128/aem.57.10.2981-2985.1991
  • [3] Meher-Homji, Z., Mangalore, R. P., Johnson, P. D. R., & Chua, K. Y. L. (2017). Chromobacterium violaceum infection in chronic granulomatous disease: A case report and review of the literature. JMM Case Reports, 4(1), e005084. https://doi.org/10.1099/jmmcr.0.005084
  • [4] Das, K., & Mukherjee, A. K. (2005). Characterization of biochemical properties and biological activities of biosurfactants produced by Pseudomonas aeruginosa mucoid and non-mucoid strains isolated from hydrocarbon-contaminated soil samples. Applied Microbiology and Biotechnology, 69(2), 192–199. https://doi.org/10.1007/s00253-005-1975-5
  • [5] Abalos, A., Viñas, M., Sabaté, J., Manresa, M. A., & Solanas, A. M. (2004). Enhanced biodegradation of Casablanca crude oil by a microbial consortium in presence of a rhamnolipid produced by Pseudomonas aeruginosa AT10. Biodegradation, 15(4), 249–260. https://doi.org/10.1023/b:biod.0000042915.28757.fb
  • [6] Cubitto, M. A., Moran, A. C., Commendatore, M., Chiarello, M. N., Baldini, M. D., & Sineriz, F. (2004). Effects of Bacillus subtilis O9 biosurfactant on the bioremediation of crude oil-polluted soils. Biodegradation, 15(4), 281–287. https://doi.org/10.1023/B:BIOD.0000042186.58956.8f
  • [7] Ibacache-Quiroga, C., Ojeda, J., Espinoza-Vergara, G., Olivero, P., Cuellar, M., & Dinamarca, M. A. (2013). The hydrocarbon-degrading marine bacterium Cobetia sp. strain MM1IDA2H-1 produces a biosurfactant that interferes with quorum sensing of fish pathogens by signal hijacking. Microbial Biotechnology, 6(4), 394–405. https://doi.org/10.1111/1751-7915.12016
  • [8] Ceresa, C., Fracchia, L., Fedeli, E., Porta, C., & Banat, I. M. (2021). Recent advances in biomedical, therapeutic and pharmaceutical applications of microbial surfactants. Pharmaceutics, 13(4), 466. https://doi.org/10.3390/pharmaceutics13040466
  • [9] Shang, Z. Q., Wang, H. F., Zhou, S. X., & Chu, W. H. (2014). Characterization of N-acyl-homoserine lactones (AHLs)-deficient clinical isolates of Pseudomonas aeruginosa. Indian Journal of Microbiology, 54(2), 158–162. https://doi.org/10.1007/s12088-013-0435-0
  • [10] Remy, B., Mion, S., Plener, L., Elias, M., Chabriere, E., & Daudé, D. (2018). Interference in bacterial quorum sensing: A biopharmaceutical perspective. Frontiers in Pharmacology, 9, 203. https://doi.org/10.3389/fphar.2018.00203
  • [11] Defoirdt, T., Brackman, G., & Coenye, T. (2013). Quorum sensing inhibitors: How strong is the evidence? Trends in Microbiology, 21(12), 619–624. https://doi.org/10.1016/j.tim.2013.09.006
  • [12] Galloway, W. R., Hodgkinson, J. T., Bowden, S., Welch, M., & Spring, D. R. (2012). Applications of small molecule activators and inhibitors of quorum sensing in Gram-negative bacteria. Trends in Microbiology, 20(9), 449–458. https://doi.org/10.1016/j.tim.2012.06.003
  • [13] Kalia, V. C. (2013). Quorum sensing inhibitors: An overview. Biotechnology Advances, 31(2), 224–245. https://doi.org/10.1016/j.biotechadv.2012.10.004
  • [14] Brackman, G., & Coenye, T. (2015). Quorum sensing inhibitors as anti-biofilm agents. Current Pharmaceutical Design, 21(1), 5–11. https://doi.org/10.2174/1381612820666140905114627
  • [15] Richard, K. R., Lovvorn, J. J., Oliver, S. E., Ross, S. A., Benner, K. W., & Kong, M. Y. F. (2015). Chromobacterium violaceum sepsis: Rethinking conventional therapy to improve outcome. American Journal of Case Reports, 16, 740–744. https://doi.org/10.12659/AJCR.894350
  • [16] Morohoshi, T., Kato, M., Fukamachi, K., Kato, N., & Ikeda, T. (2008). N-acylhomoserine lactone regulates violacein production in Chromobacterium violaceum type strain ATCC 12472. FEMS Microbiology Letters, 279(1), 124–130. https://doi.org/10.1111/j.1574-6968.2007.01016.x
  • [17] Rahman, K. S., Rahman, T. J., Kourkoutas, Y., Petsas, I., Marchant, R., & Banat, I. M. (2003). Enhanced bioremediation of n-alkane in petroleum sludge using bacterial consortium amended with rhamnolipid and micronutrients. Bioresource Technology, 90(2), 159–168. https://doi.org/10.1016/S0960-8524(03)00114-7
  • [18] Kanagasabhapathy, M., Yamazaki, G., Ishida, A., Sasaki, H., & Nagata, S. (2009). Presence of quorum-sensing inhibitor-like compounds from bacteria isolated from the brown alga Colpomenia sinuosa. Letters in Applied Microbiology, 49(5), 573–579. https://doi.org/10.1111/j.1472-765X.2009.02711.x
  • [19] Younis, K. M., Usup, G., & Ahmad, A. (2016). Secondary metabolites produced by marine Streptomyces as antibiofilm and anti-quorum sensing inhibitors of uropathogen Proteus mirabilis. Environmental Science and Pollution Research, 23(5), 4756–4767. https://doi.org/10.1007/s11356-015-5687-x
  • [20] Abudoleh, S. M., & Mahasneh, A. M. (2017). Anti-quorum sensing activity of substances isolated from wild berry-associated bacteria. Avicenna Journal of Medical Biotechnology, 9(1), 23–30.
  • [21] Nithya, C., Aravindraja, C., & Pandian, S. K. (2010). Bacillus pumilus of Palk Bay origin inhibits quorum-sensing-mediated virulence factors in Gram-negative bacteria. Research in Microbiology, 161(4), 293–304. https://doi.org/10.1016/j.resmic.2010.03.006
  • [22] Blosser, R. S., & Gray, K. M. (2000). Extraction of violacein from Chromobacterium violaceum provides a new quantitative bioassay for N-acyl homoserine lactone autoinducers. Journal of Microbiological Methods, 40(1), 47–55. https://doi.org/10.1016/S0167-7012(99)00136-5
  • [23] Khan, M. S., Zahin, M., Hasan, S., Husain, F. M., & Ahmad, I. (2009). Inhibition of quorum-sensing regulated bacterial functions by plant essential oils with special reference to clove oil. Letters in Applied Microbiology, 49(3), 354–360. https://doi.org/10.1111/j.1472-765X.2009.02664.x
  • [24] Theodora, N. A., Dominika, D., & Waturangi, D. E. (2019). Screening and quantification of anti-quorum sensing and antibiofilm activities of phyllosphere bacteria against biofilm-forming bacteria. BMC Research Notes, 12(1), 732. https://doi.org/10.1186/s13104-019-4774-3
  • [25] Kaszab, E., Kriszt, B., Atzél, B., Szabó, G., Szabó, I., Harkai, P., & Szoboszlay, S. (2010). The occurrence of multidrug-resistant Pseudomonas aeruginosa on hydrocarbon-contaminated sites. Microbial Ecology, 59(1), 37–45. https://doi.org/10.1007/s00248-009-9556-3
  • [26] Choo, J. H., Rukayadi, Y., & Hwang, J. K. (2006). Inhibition of bacterial quorum sensing by vanilla extract. Letters in Applied Microbiology, 42(6), 637–641. https://doi.org/10.1111/j.1472-765X.2006.01928.x
  • [27] Rasmussen, T. B., Bjarnsholt, T., Skindersoe, M. E., Hentzer, M., Kristoffersen, P., Kote, M., Nielsen, J., Eberl, L., & Givskov, M. (2005). Screening for quorum-sensing inhibitors (QSI) by use of a novel genetic system, the QSI selector. Journal of Bacteriology, 187(5), 1799–1814. https://doi.org/10.1128/JB.187.5.1799-1814.2005
  • [28] Altaee, N., Kadhim, M. J., & Hameed, I. H. (2016). Detection of volatile compounds produced by Pseudomonas aeruginosa isolated from UTI patients by gas chromatography–mass spectrometry. International Journal of Toxicological and Pharmacological Research, 8(6), 462–470.
  • [29] Vasavi, H. S., Arun, A. B., & Rekha, P. D. (2014). Anti-quorum sensing activity of Psidium guajava L. flavonoids against Chromobacterium violaceum and Pseudomonas aeruginosa PAO1. Microbiology and Immunology, 58(5), 286–293. https://doi.org/10.1111/1868-6044.12112
  • [30] Wahjudi, M., Papaioannou, E., Hendrawati, O., van Assen, A. H. G., van Merkerk, R., Cool, R. H., Poelarends, G. J., & Quax, W. J. (2011). PA0305 of Pseudomonas aeruginosa is a quorum quenching acylhomoserine lactone acylase belonging to the Ntn hydrolase superfamily. Microbiology, 157(7), 2042–2055. https://doi.org/10.1099/mic.0.043935-0
  • [31] Fitriani, A., Ayuningtyas, D. P., & Kusnadi, K. (2016). Inhibition of quorum sensing in Chromobacterium violaceum CV026 by violacein produced by Pseudomonas aeruginosa. Journal of Experimental Biology and Agricultural Sciences, 4(1), 104–108. https://doi.org/10.18006/2016.4(1).104.108
  • [32] Sharahi, J. Y., Azimi, T., Shariati, A., Safari, H., Tehrani, M. K., & Hashemi, A. (2019). Advanced strategies for combating bacterial biofilms. Journal of Cellular Physiology, 234(9), 14689–14708. https://doi.org/10.1002/jcp.28225
There are 32 citations in total.

Details

Primary Language English
Subjects Bacteriology, Infectious Agents
Journal Section Research Article
Authors

Belgin Erdem 0000-0001-9108-5561

Esin Kıray 0000-0002-6908-5909

Dilek Yalçın 0000-0003-2127-8186

İlkay Açıkgöz Erkaya 0000-0003-1730-4951

Project Number Project No: FBA-11-10
Submission Date October 10, 2025
Acceptance Date January 20, 2026
Publication Date February 27, 2026
DOI https://doi.org/10.17776/csj.1800467
IZ https://izlik.org/JA29WA63RZ
Published in Issue Year 2026 Volume: 47 Issue: 1

Cite

APA Erdem, B., Kıray, E., Yalçın, D., & Açıkgöz Erkaya, İ. (2026). Bioremediation-Associated Antibiofilm and Quorum-Sensing Inhibition by Pseudomonas aeruginosa Isolates from Petroleum-Contaminated Environments. Cumhuriyet Science Journal, 47(1), 17-24. https://doi.org/10.17776/csj.1800467

As of 2026, Cumhuriyet Science Journal will be published in six issues per year, released in February, April, June, August, October, and December