A Computational Study of 1-Substituted Methyl 9-Methyl-9H-Pyrido[3,4- b]indole-3-Carboxylate: Quantum Chemical Descriptors, FMO and NBO Analysis
Abstract
This work dealt with the
investigation of the methyl 9H-pyrido[3,4-b]indole-3-carboxylate (Basic
compound) and its C1-substituted derivatives to search for the best substituent
group that enhances the chemical reactivity behavior of the Basic compound. In
this context, DFT (Density Functional Theory) calculations were performed at
B3LYP level of theory at three basis sets, also
in 10 different solvents because the chemical behavior strongly depends on the
solvent media. This study revealed that the
anthracene-9-yl substitution on the C1-position of the Basic compound has
increased the chemical reactivity of the Basic compound more than those of the
other substituent groups. Also, the
results were supported by the NBO analysis: the highest electron delocalization
for the structure A was found out π C19-C20→ pv C42-C43 with the
interaction energy of the 50.98 kcalmol-1, due to the anthracene-9-yl
substitution on the C1-position of the Basic compound makes the
electron delocalization on the substituted compound enhances, at
6-311++g**basis set in the water phase.
Keywords
References
- [1] Martin L., Leon A., Martin M. A., Castillo B. and Menendez J.C., “Detection and characterization of cyclodextrin complexes with β-carboline derivatives by spectroscopic techniques”, Journal of Pharmaceutical and Biomedical Analysis, 2003, 32, 991-1001.
- [2] Pari K., Sundari C. S, Chandani S., Balasubramanian D., “β -Carbolines That Accumulate in Human Tissues May Serve a Protective Role against Oxidative Stress”, THE JOURNAL OF BIOLOGICAL CHEMISTRY. 2000, 275(4), 2455–2462.
- [3] Prinsep M. R, Blunt J.W. and Munro M.H.G, “New Cytotoxic β -Carboline Alkaloids from the Marine Bryozoan, Cribricellina Cribraria”, Journal of Natural Products. 1991, 54(4), 1068-1076.
- [4] Allen M.S., Tan Y.C., Trudell M.L., Narayanan K., Schindler L.R., Martin M.J., Schultz C., Hagen T.J., Koehler K.F., Codding P.W., Skolnick P. and Cook J.M., “Synthetic and Computer-Assisted Analyses of the Pharmacophore for the Benzodiazepine Receptor Inverse Agonist Site”, J. Med. Chem.,1990, 33: 2343-2357.
- [5] Allen M.S., LaLoggia A.J., Dorn L.J., Martin M.J., Costantino G., Hagen T.J., Koehler K.F., Skolnick P. and Cook J.M., “Predictive Binding of β -Carboline Inverse Agonists and Antagonists via the CoMFA/GOLPE Approach” J. Med. Chem., 1992, 35: 4001-4010.
- [6] Glennon R.A., Dukat M., Grella B., Seo Hong S.S., Costantino L., Teitler M., Smith C., Egan C., Davis K. and Mattson M.V., “Binding of β -carbolines and related agents at serotonin (5-HT2 and 5-HT1A), dopamine (D2) and benzodiazepine receptors”, Drug and Alcohol Dependence, 2000, 60: 121–132.
- [7] Brahmbhatt K.G., Ahmed N., Sabde S., Mitra D., Singh I.P. and Bhutani K.K., “Synthesis and evaluation of β -carboline derivatives as inhibitors of human immunodeficiency virus”, Bioorganic & Medicinal Chemistry Letters, 2010, 20: 4416- 4419.
- [8] Kusurkar R.S and Goswami S.K., “Efficient one-pot synthesis of anti-HIVand anti-tumour β-carbolines”, Tetrahedron, 2004, 60: 5315–5318.
Details
Primary Language
English
Subjects
Pharmacology and Pharmaceutical Sciences
Journal Section
Research Article
Authors
Mustafa Elik
Cumhuriyet University, Education Faculty
Türkiye
Goncagül Serdaroğlu
Cumhuriyet University, Education Faculty
Publication Date
December 8, 2017
Submission Date
November 19, 2017
Acceptance Date
December 6, 2017
Published in Issue
Year 2017 Volume: 38 Number: 4
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