The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster

Ertan Mahir Korkmaz

doi:10.17776/csj.1195087

EN

The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster

Abstract

Neodiprion is a genus belonging to the small sawfly family Diprionidae, feeding the plant family Pinaceae entirely. Here, the complete mitogenome of the redheaded pine sawfly Neodiprion lecontei (Hymenoptera: Diprionidae) was assembled, annotated as third party annotation from the raw genome dataset of N. lecontei and comparatively characterised. The length of N. lecontei mitogenome was 16,067 bp in size, with an AT content of 81.32%. The initiation codons of protein coding genes (PCGs) are ATN (except for nad6 (TTA-Phe), while termination codons are TAA or T−. tRNA genes favoured usual anticodons except for trnS1 which preferred an unusual anticodon GCU. Compared with the Neodiprion sertifer mitogenome, the ARNS1EF gene cluster was rearranged as RAS1RNEF and trnR gene has a duplicated copy, revealing a new event not formerly reported in Symphyta. The phylogeny confirms the position of N. lecontei within the family of Diprionidae and supports the monophyly of included genera and families in Tenthredinoidea.

Keywords

References

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Details

Primary Language

English

Subjects

Structural Biology

Journal Section

Research Article

Authors

Ertan Mahir Korkmaz ^*
0000-0003-0699-1354
Türkiye

Publication Date

December 27, 2022

Submission Date

October 26, 2022

Acceptance Date

December 20, 2022

Published in Issue

Year 2022 Volume: 43 Number: 4

DOI

https://doi.org/10.17776/csj.1195087

IZ

https://izlik.org/JA86AK54ZE

Cite

RIS / Bibtex

APA

Korkmaz, E. M. (2022). The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster. Cumhuriyet Science Journal, 43(4), 577-583. https://doi.org/10.17776/csj.1195087

AMA

1.Korkmaz EM. The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster. CSJ. 2022;43(4):577-583. doi:10.17776/csj.1195087

Chicago

Korkmaz, Ertan Mahir. 2022. “The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion Lecontei (Hymenoptera: Diprionidae): Duplication of TrnR Gene and Rearrangement in the ARNS1EF Gene Cluster”. Cumhuriyet Science Journal 43 (4): 577-83. https://doi.org/10.17776/csj.1195087.

EndNote

Korkmaz EM (December 1, 2022) The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster. Cumhuriyet Science Journal 43 4 577–583.

IEEE

[1]E. M. Korkmaz, “The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster”, CSJ, vol. 43, no. 4, pp. 577–583, Dec. 2022, doi: 10.17776/csj.1195087.

ISNAD

Korkmaz, Ertan Mahir. “The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion Lecontei (Hymenoptera: Diprionidae): Duplication of TrnR Gene and Rearrangement in the ARNS1EF Gene Cluster”. Cumhuriyet Science Journal 43/4 (December 1, 2022): 577-583. https://doi.org/10.17776/csj.1195087.

JAMA

1.Korkmaz EM. The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster. CSJ. 2022;43:577–583.

MLA

Korkmaz, Ertan Mahir. “The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion Lecontei (Hymenoptera: Diprionidae): Duplication of TrnR Gene and Rearrangement in the ARNS1EF Gene Cluster”. Cumhuriyet Science Journal, vol. 43, no. 4, Dec. 2022, pp. 577-83, doi:10.17776/csj.1195087.

Vancouver

1.Ertan Mahir Korkmaz. The Complete Mitogenome of Redheaded Pine Sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae): Duplication of trnR Gene and Rearrangement in the ARNS1EF Gene Cluster. CSJ. 2022 Dec. 1;43(4):577-83. doi:10.17776/csj.1195087

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Dynamic Rearrangement Events in the Mitogenomes of Gall Inducing Wasps, Diplolepis fructuum and Diplolepis rosae (Hymenoptera: Diplolepididae)

Cumhuriyet Science Journal

https://doi.org/10.17776/csj.1723926